Building on x86-bm-2.ocamllabs.io
(from ocaml/opam:debian-unstable)
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/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMUTF8 never)
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "sudo ln -f /usr/bin/opam-2.1 /usr/bin/opam"))
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/: (run (network host)
(shell "rm -rf ~/opam-repository && git clone -q 'https://github.com/ocaml/opam-repository' ~/opam-repository && git -C ~/opam-repository checkout -q b1ed080260d9fb3332ffd1ed74a70b40f8d46d66"))
2021-12-03 06:12.47 ---> using "470a5139cd314c308ef6f8a7115ce3eecbef27ce3b36ad57c590d49c448a8f62" from cache
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
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/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=default '4.10' '4.10.2'"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "4.10.2"} | "ocaml-system" {= "4.10.2"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> retrieved ocaml-base-compiler.4.10.2 (cached)
-> installed ocaml-base-compiler.4.10.2
-> installed ocaml-config.1
-> installed ocaml.4.10.2
Done.
# Run eval $(opam env --switch=4.10) to update the current shell environment
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/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [165 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2021-12-02-2006.44-F-2021-11-23-2001.32.pdiff [526 kB]
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages T-2021-12-02-2006.44-F-2021-11-23-2001.32.pdiff [526 kB]
- Fetched 755 kB in 2s (363 kB/s)
- Reading package lists...
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/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"conf-sundials.1\"\
\nopam install -vy \"conf-sundials.1\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"conf-sundials.1\" | grep -q '\"debian-unstable\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
Nothing to do.
[NOTE] conf-sundials.1 is not installed.
The following actions will be performed:
- install conf-sundials 1
The following system packages will first need to be installed:
libsundials-dev
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
Let opam run your package manager to install the required system packages?
(answer 'n' for other options) [Y/n] y
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "libsundials-dev"
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- Setting up librhash0:amd64 (1.4.2-1) ...
- Setting up libxcb-randr0:amd64 (1.14-3) ...
- Setting up libnl-3-200:amd64 (3.4.0-1+b1) ...
- Setting up libmpdec3:amd64 (2.5.1-2) ...
- Setting up libpsm2-2 (11.2.185-1) ...
- Setting up openmpi-common (4.1.2-1) ...
- Setting up libcxsparse3:amd64 (1:5.10.1+dfsg-3) ...
- Setting up cmake-data (3.22.0-1) ...
- Setting up libpsm-infinipath1 (3.3+20.604758e7-6.1) ...
- update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode
- Setting up libsundials-cvodes4:amd64 (5.8.0+dfsg-1) ...
- Setting up libopengl-dev:amd64 (1.3.4-2+b1) ...
- Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-8) ...
- Setting up libsundials-kinsol4:amd64 (5.8.0+dfsg-1) ...
- Setting up libscotch-6.1:amd64 (6.1.1-2) ...
- Setting up libtrilinos-trilinosss12:amd64 (12.18.1-2+b1) ...
- Setting up valgrind (1:3.18.1-1) ...
- Setting up libdrm-common (2.4.108-1) ...
- Setting up libelf1:amd64 (0.186-1) ...
- Setting up valgrind-mpi (1:3.18.1-1) ...
- Setting up libxml2:amd64 (2.9.12+dfsg-5+b1) ...
- Setting up libsuitesparseconfig5:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libtrilinos-trilinosss-dev:amd64 (12.18.1-2+b1) ...
- Setting up libprocps8:amd64 (2:3.3.17-5) ...
- Setting up libsz2:amd64 (1.0.6-1) ...
- Setting up libsundials-sunmatrix2:amd64 (5.8.0+dfsg-1) ...
- Setting up librbio2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libsource-highlight4v5 (3.1.9-4.1) ...
- Setting up libpython3.9-stdlib:amd64 (3.9.9-1) ...
- Setting up libpython3-stdlib:amd64 (3.9.8-1) ...
- Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up libwayland-client0:amd64 (1.19.0-2+b1) ...
- Setting up libamd2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libdw1:amd64 (0.186-1) ...
- Setting up libevent-extra-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up liblapack3:amd64 (3.10.0-1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libopenblas0-pthread:amd64 (0.3.18+ds-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode
- Setting up libcolamd2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libyaml-dev:amd64 (0.2.2-1) ...
- Setting up libtool (2.4.6-15) ...
- Setting up libarchive13:amd64 (3.4.3-2+b1) ...
- Setting up libfftw3-bin (3.3.8-2) ...
- Setting up libgfortran-11-dev:amd64 (11.2.0-12) ...
- Setting up libdebuginfod1:amd64 (0.186-1) ...
- Setting up libaec-dev:amd64 (1.0.6-1) ...
- Setting up libjpeg-dev:amd64 (1:2.1.2-1) ...
- Setting up libsuperlu5:amd64 (5.3.0+dfsg1-2) ...
- Setting up libevent-openssl-2.1-7:amd64 (2.1.12-stable-1) ...
- Setting up m4 (1.4.18-5) ...
- Setting up valgrind-dbg (1:3.18.1-1) ...
- Setting up libhwloc-plugins:amd64 (2.6.0-1) ...
- Setting up libnuma-dev:amd64 (2.0.14-3) ...
- Setting up libnl-route-3-200:amd64 (3.4.0-1+b1) ...
- Setting up libsliplu1:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libcamd2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libmongoose2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libpython3.9:amd64 (3.9.9-1) ...
- Setting up libjs-jquery-ui (1.13.0+dfsg-1) ...
- Setting up libllvm12:amd64 (1:12.0.1-17) ...
- Setting up shared-mime-info (2.0-1) ...
- Setting up opencl-clhpp-headers (3.0~2.0.15-1) ...
- Setting up libevent-dev (2.1.12-stable-1) ...
- Setting up libbabeltrace1:amd64 (1.5.8-1+b4) ...
- Setting up ocl-icd-opencl-dev:amd64 (2.2.14-3) ...
- Setting up gfortran-11 (11.2.0-12) ...
- Setting up autoconf (2.71-2) ...
- Setting up libdrm2:amd64 (2.4.108-1) ...
- Setting up libnl-3-dev:amd64 (3.4.0-1+b1) ...
- Setting up libopenblas0:amd64 (0.3.18+ds-2) ...
- Setting up libklu1:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libccolamd2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up procps (2:3.3.17-5) ...
- Setting up cmake (3.22.0-1) ...
- Setting up libfftw3-dev:amd64 (3.3.8-2) ...
- Setting up libcholmod3:amd64 (1:5.10.1+dfsg-3) ...
- Setting up python3.9 (3.9.9-1) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.108-1) ...
- Setting up automake (1:1.16.5-1.1) ...
- update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
- Setting up libopenblas-pthread-dev:amd64 (0.3.18+ds-2) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode
- Setting up mesa-vulkan-drivers:amd64 (21.2.6-1) ...
- Setting up libspqr2:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libibverbs1:amd64 (38.0-1) ...
- Setting up libdrm-nouveau2:amd64 (2.4.108-1) ...
- Setting up libpmix2:amd64 (4.1.1~rc5-1+b1) ...
- Setting up libgbm1:amd64 (21.2.6-1) ...
- Setting up ibverbs-providers:amd64 (38.0-1) ...
- Setting up libdrm-radeon1:amd64 (2.4.108-1) ...
- Setting up libdrm-intel1:amd64 (2.4.108-1) ...
- Setting up libgl1-mesa-dri:amd64 (21.2.6-1) ...
- Setting up python3 (3.9.8-1) ...
- running python rtupdate hooks for python3.9...
- running python post-rtupdate hooks for python3.9...
- Setting up gfortran (4:11.2.0-2) ...
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
- Setting up libnl-route-3-dev:amd64 (3.4.0-1+b1) ...
- Setting up libltdl-dev:amd64 (2.4.6-15) ...
- Setting up libopenblas-dev:amd64 (0.3.18+ds-2) ...
- Setting up libegl-mesa0:amd64 (21.2.6-1) ...
- Setting up gdb (10.1-2) ...
- Setting up libumfpack5:amd64 (1:5.10.1+dfsg-3) ...
- Setting up liblapack-dev:amd64 (3.10.0-1) ...
- Setting up libegl1:amd64 (1.3.4-2+b1) ...
- Setting up libhwloc-dev:amd64 (2.6.0-1) ...
- Setting up libsuperlu-dev:amd64 (5.3.0+dfsg1-2) ...
- Setting up libpmix-dev:amd64 (4.1.1~rc5-1+b1) ...
- Setting up librdmacm1:amd64 (38.0-1) ...
- Setting up libucx0:amd64 (1.11.2-1) ...
- Setting up libglx-mesa0:amd64 (21.2.6-1) ...
- Setting up libpetsc3.15-dev-examples (3.15.5+dfsg1-1) ...
- Setting up libglx0:amd64 (1.3.4-2+b1) ...
- Setting up libsuitesparse-dev:amd64 (1:5.10.1+dfsg-3) ...
- Setting up libcoarrays-dev:amd64 (2.9.2-3) ...
- Setting up libibverbs-dev:amd64 (38.0-1) ...
- Setting up libgl1:amd64 (1.3.4-2+b1) ...
- Setting up libglx-dev:amd64 (1.3.4-2+b1) ...
- Setting up libgl-dev:amd64 (1.3.4-2+b1) ...
- Setting up libfabric1 (1.11.0-2) ...
- Setting up libegl-dev:amd64 (1.3.4-2+b1) ...
- Setting up libopenmpi3:amd64 (4.1.2-1) ...
- Setting up libptscotch-6.1:amd64 (6.1.1-2) ...
- Setting up libfftw3-mpi3:amd64 (3.3.8-2) ...
- Setting up libcaf-openmpi-3:amd64 (2.9.2-3) ...
- Setting up libgles-dev:amd64 (1.3.4-2+b1) ...
- Setting up openmpi-bin (4.1.2-1) ...
- update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
- update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
- Setting up libhdf5-openmpi-103-1:amd64 (1.10.7+repack-4) ...
- Setting up libtrilinos-zoltan12:amd64 (12.18.1-2+b1) ...
- Setting up libcombblas1.16.0:amd64 (1.6.2-6) ...
- Setting up libtrilinos-teuchos12:amd64 (12.18.1-2+b1) ...
- Setting up libfftw3-mpi-dev:amd64 (3.3.8-2) ...
- Setting up mpi-default-bin (1.14) ...
- Setting up libglvnd-dev:amd64 (1.3.4-2+b1) ...
- Setting up libcoarrays-openmpi-dev:amd64 (2.9.2-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/open-coarrays/openmpi/bin/caf to provide /usr/bin/caf.openmpi (caf-openmpi) in auto mode
- update-alternatives: using /usr/bin/caf.openmpi to provide /usr/bin/caf (caf) in auto mode
- Setting up libhdf5-openmpi-fortran-102:amd64 (1.10.7+repack-4) ...
- Setting up libtrilinos-zoltan-dev:amd64 (12.18.1-2+b1) ...
- Setting up libsuperlu-dist7:amd64 (7.1.0+dfsg1-2) ...
- Setting up libhdf5-openmpi-hl-100:amd64 (1.10.7+repack-4) ...
- Setting up libgl1-mesa-dev:amd64 (21.2.6-1) ...
- Setting up libsundials-nvecparallel-mpi4:amd64 (5.8.0+dfsg-1) ...
- Setting up libopenmpi-dev:amd64 (4.1.2-1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode
- Setting up libhdf5-openmpi-cpp-103-1:amd64 (1.10.7+repack-4) ...
- Setting up libhdf5-openmpi-hl-cpp-100:amd64 (1.10.7+repack-4) ...
- Setting up libtrilinos-epetra12:amd64 (12.18.1-2+b1) ...
- Setting up libhdf5-openmpi-hl-fortran-100:amd64 (1.10.7+repack-4) ...
- Setting up libscalapack-openmpi2.1:amd64 (2.1.0-4) ...
- Setting up libmumps-5.4:amd64 (5.4.1-2) ...
- Setting up libhypre:amd64 (2.22.1-3) ...
- Setting up libtrilinos-aztecoo12:amd64 (12.18.1-2+b1) ...
- Setting up libsuperlu-dist-dev:amd64 (7.1.0+dfsg1-2) ...
- Setting up libtrilinos-triutils12:amd64 (12.18.1-2+b1) ...
- Setting up libscalapack-openmpi-dev:amd64 (2.1.0-4) ...
- Setting up mpi-default-dev (1.14) ...
- Setting up libtrilinos-galeri12:amd64 (12.18.1-2+b1) ...
- Setting up libtrilinos-aztecoo-dev:amd64 (12.18.1-2+b1) ...
- Setting up libscalapack-mpi-dev:amd64 (2.1.0-4) ...
- Setting up libhdf5-openmpi-dev (1.10.7+repack-4) ...
- update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
- update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links
- update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
- Setting up libmumps-dev:amd64 (5.4.1-2) ...
- Setting up libscotch-dev (6.1.1-2) ...
- Setting up libsundials-nvecparallel-hypre4:amd64 (5.8.0+dfsg-1) ...
- Setting up libhypre-dev:amd64 (2.22.1-3) ...
- Setting up libptscotch-dev (6.1.1-2) ...
- Setting up libtrilinos-epetraext12:amd64 (12.18.1-2+b1) ...
- Setting up libhdf5-mpi-dev (1.10.7+repack-4) ...
- Setting up libtrilinos-amesos12:amd64 (12.18.1-2+b1) ...
- Setting up libpetsc3.15-dev-common (3.15.5+dfsg1-1) ...
- Setting up libtrilinos-ifpack12:amd64 (12.18.1-2+b1) ...
- Setting up libtrilinos-ml12:amd64 (12.18.1-2+b1) ...
- Setting up libtrilinos-ml-dev:amd64 (12.18.1-2+b1) ...
- Setting up libpetsc-real3.15:amd64 (3.15.5+dfsg1-1) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.15 (libpetsc.so.3.15) in auto mode
- Setting up libpetsc-real3.15-dev:amd64 (3.15.5+dfsg1-1) ...
- update-alternatives: error: no alternatives for petsc
- update-alternatives: using /usr/lib/petscdir/petsc3.15/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode
- update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode
- update-alternatives: using /usr/lib/petscdir/petsc3.15/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.15 (petsc3.15) in auto mode
- Setting up libsundials-nvecparallel-petsc4:amd64 (5.8.0+dfsg-1) ...
- Setting up libpetsc-real-dev (3.15.5+dfsg1-1) ...
- Setting up libsundials-sunlinsol2:amd64 (5.8.0+dfsg-1) ...
- Setting up petsc-dev (3.15.5+dfsg1-1) ...
- Setting up libsundials-dev (5.8.0+dfsg-1) ...
- Processing triggers for libc-bin (2.32-4) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 2/3: [conf-sundials: cc test.c]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "cc" "-E" "test.c" (CWD=/home/opam/.opam/4.10/.opam-switch/build/conf-sundials.1)
- # 0 "test.c"
- # 0 "<built-in>"
- # 0 "<command-line>"
- # 1 "/usr/include/stdc-predef.h" 1 3 4
- # 0 "<command-line>" 2
- # 1 "test.c"
- # 1 "/usr/include/sundials/sundials_config.h" 1 3 4
- # 17 "/usr/include/sundials/sundials_config.h" 3 4
- # 1 "/usr/include/sundials/sundials_export.h" 1 3 4
- # 18 "/usr/include/sundials/sundials_config.h" 2 3 4
- # 2 "test.c" 2
-> compiled conf-sundials.1
-> installed conf-sundials.1
Done.
# Run eval $(opam env) to update the current shell environment
2021-12-03 06:13.49 ---> saved as "f884c25be7af2f91e373bec3268d0cc3603caaa8134e3d7aec09aeec29c7a6ba"
Job succeeded
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