Building on clete.ocamllabs.io
(from ocurrent/opam:debian-unstable)
WARNING: Error loading config file: .dockercfg: $HOME is not defined
2021-07-04 07:54.23 ---> using "ec5d5faa8619574bfe663422158251f52f4b465bd9d157e348e692194b4f4a2a" from cache
/: (user (uid 1000) (gid 1000))
/: (env OPAMPRECISETRACKING 1)
/: (env OPAMDEPEXTYES 1)
/: (env OPAMUTF8 never)
/: (run (network host)
(shell "\
\n set -e\
\n git clone -q git://github.com/kit-ty-kate/opam.git /tmp/opam\
\n git -C /tmp/opam checkout -q '72695bfac80dbcd1d2f10287b2626d18d4acc9f2'\
\n opam remote set-url default git://github.com/ocaml/opam-repository.git\
\n opam pin add -yn /tmp/opam > /dev/null\
\n opam install -y opam-devel opam-0install-cudf 'ocamlfind>=1.9'\
\n sudo mv \"$(opam var opam-devel:lib)/opam\" /usr/bin/opam\
\n rm -rf /tmp/opam /tmp/depext.txt ~/.opam\
\n if ! test -d ~/opam-repository; then\
\n git clone -q git://github.com/ocaml/opam-repository.git ~/opam-repository\
\n else\
\n git -C ~/opam-repository pull -q origin master\
\n fi\
\n git -C ~/opam-repository checkout -q '9c3fe9d253394788e95360e5c2bcb22722fae6f5'\
\n "))
[default] Initialised
<><> Synchronising pinned packages ><><><><><><><><><><><><><><><><><><><><><><>
[opam-devel.2.1.0~beta4] no changes from git+file:///tmp/opam#HEAD
The following actions will be performed:
- install ocamlfind 1.9.1
- install seq base [required by re]
- install cmdliner 1.0.4 [required by opam-devel]
- install dune 2.9.0 [required by opam-0install-cudf, opam-devel]
- install ocamlbuild 0.14.0 [required by cudf]
- install base-bytes base [required by extlib]
- install stdlib-shims 0.3.0 [required by ocamlgraph]
- install re 1.9.0 [required by opam-client]
- install opam-file-format 2.1.3 [required by opam-format]
- install cppo 1.6.7 [required by extlib]
- install 0install-solver 2.17 [required by opam-0install-cudf]
- install ocamlgraph 2.0.0 [required by dose3]
- install extlib 1.7.7-1 [required by cudf, opam-client]
- install opam-core 2.1.0~beta4* [required by opam-format]
- install cudf 0.9-1 [required by opam-0install-cudf]
- install opam-format 2.1.0~beta4* [required by opam-repository, opam-solver]
- install opam-0install-cudf 0.4.2
- install mccs 1.1+13 [required by opam-solver]
- install dose3 5.0.1-1 [required by opam-solver]
- install opam-repository 2.1.0~beta4* [required by opam-client]
- install opam-solver 2.1.0~beta4* [required by opam-client]
- install opam-state 2.1.0~beta4* [required by opam-client]
- install opam-client 2.1.0~beta4* [required by opam-devel]
- install opam-devel 2.1.0~beta4*
===== 24 to install =====
<><> Gathering sources ><><><><><><><><><><><><><><><><><><><><><><><><><><><><>
[cmdliner.1.0.4] downloaded from http://erratique.ch/software/cmdliner/releases/cmdliner-1.0.4.tbz
[cppo.1.6.7] downloaded from https://github.com/ocaml-community/cppo/releases/download/v1.6.7/cppo-v1.6.7.tbz
[0install-solver.2.17] downloaded from https://github.com/0install/0install/releases/download/v2.17/0install-v2.17.tbz
[cudf.0.9-1] downloaded from https://gforge.inria.fr/frs/download.php/36602/cudf-0.9.tar.gz
[extlib.1.7.7-1] downloaded from https://ygrek.org/p/release/ocaml-extlib/extlib-1.7.7.tar.gz
[dose3.5.0.1-1] downloaded from https://gforge.inria.fr/frs/download.php/file/36063/dose3-5.0.1.tar.gz
[dune.2.9.0] downloaded from https://github.com/ocaml/dune/releases/download/2.9.0/dune-2.9.0.tbz
[ocamlbuild.0.14.0] downloaded from https://github.com/ocaml/ocamlbuild/archive/0.14.0.tar.gz
[ocamlfind.1.9.1] downloaded from http://download.camlcity.org/download/findlib-1.9.1.tar.gz
[mccs.1.1+13] downloaded from https://github.com/AltGr/ocaml-mccs/archive/1.1+13.tar.gz
[ocamlgraph.2.0.0] downloaded from https://github.com/backtracking/ocamlgraph/releases/download/2.0.0/ocamlgraph-2.0.0.tbz
[opam-0install-cudf.0.4.2] downloaded from https://github.com/ocaml-opam/opam-0install-solver/releases/download/v0.4.2/opam-0install-cudf-v0.4.2.tbz
[re.1.9.0] downloaded from https://github.com/ocaml/ocaml-re/releases/download/1.9.0/re-1.9.0.tbz
[opam-file-format.2.1.3] downloaded from https://github.com/ocaml/opam-file-format/archive/2.1.3.tar.gz
[stdlib-shims.0.3.0] downloaded from https://github.com/ocaml/stdlib-shims/releases/download/0.3.0/stdlib-shims-0.3.0.tbz
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed seq.base
-> installed cmdliner.1.0.4
-> installed ocamlfind.1.9.1
-> installed base-bytes.base
-> installed ocamlbuild.0.14.0
-> installed dune.2.9.0
-> installed stdlib-shims.0.3.0
-> installed opam-file-format.2.1.3
-> installed 0install-solver.2.17
-> installed cppo.1.6.7
-> installed re.1.9.0
-> installed ocamlgraph.2.0.0
-> installed extlib.1.7.7-1
-> installed opam-core.2.1.0~beta4
-> installed cudf.0.9-1
-> installed opam-0install-cudf.0.4.2
-> installed mccs.1.1+13
-> installed opam-format.2.1.0~beta4
-> installed opam-repository.2.1.0~beta4
-> installed dose3.5.0.1-1
-> installed opam-state.2.1.0~beta4
-> installed opam-solver.2.1.0~beta4
-> installed opam-client.2.1.0~beta4
-> installed opam-devel.2.1.0~beta4
Done.
<><> opam-devel.2.1.0~beta4 installed successfully ><><><><><><><><><><><><><><>
=> The development version of opam has been successfully compiled into /home/opam/.opam/4.11/lib/opam-devel. You should not run it from there, please install the binaries to your PATH, e.g. with
sudo cp /home/opam/.opam/4.11/lib/opam-devel/opam /usr/local/bin
If you just want to give it a try without altering your current installation, you could use instead:
alias opam2="OPAMROOT=~/.opam2 /home/opam/.opam/4.11/lib/opam-devel/opam"
# Run eval $(opam env) to update the current shell environment
2021-07-04 07:54.23 ---> using "307be9aa5cdafafceded4bdc6f1d2d6cc6421661c3851f395cf39dd0065265a9" from cache
/: (env OPAMEXTERNALSOLVER builtin-0install)
/: (env OPAMCRITERIA +removed)
/: (run (shell "rm -rf ~/.opam && opam init -ya --bare --config ~/.opamrc-sandbox ~/opam-repository"))
Configuring from /home/opam/.opamrc-sandbox, then /home/opam/.opamrc, and finally from built-in defaults.
Checking for available remotes: rsync and local, git.
- you won't be able to use mercurial repositories unless you install the hg command on your system.
- you won't be able to use darcs repositories unless you install the darcs command on your system.
<><> Fetching repository information ><><><><><><><><><><><><><><><><><><><><><>
[default] Initialised
User configuration:
~/.profile is already up-to-date.
[NOTE] Make sure that ~/.profile is well sourced in your ~/.bashrc.
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/: (run (network host)
(shell "git clone -q 'git://github.com/ocaml/ocaml-beta-repository.git' ~/'beta' && git -C ~/'beta' checkout -q 79aeeadd813bdae424ab53f882f08bee0a4e0b89"))
2021-07-04 07:54.23 ---> using "0123e084a7b7841fc01d674ea3cc62b640a19885601c401c0149be13108a5da4" from cache
/: (run (shell "opam repository add --dont-select 'beta' ~/'beta'"))
[beta] Initialised
2021-07-04 07:54.23 ---> using "4382217c65ee8c899c1e38e76fe879b949ffb708f73e6e0a95f0a3814d01dd54" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "opam switch create --repositories=beta,default 4.10.2"))
<><> Installing new switch packages <><><><><><><><><><><><><><><><><><><><><><>
Switch invariant: ["ocaml-base-compiler" {= "4.10.2"} | "ocaml-system" {= "4.10.2"}]
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
-> installed base-bigarray.base
-> installed base-threads.base
-> installed base-unix.base
-> retrieved ocaml-base-compiler.4.10.2 (cached)
-> installed ocaml-base-compiler.4.10.2
-> installed ocaml-config.1
-> installed ocaml.4.10.2
Done.
# Run eval $(opam env --switch=4.10.2) to update the current shell environment
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/: (run (network host)
(shell "opam update --depexts"))
+ /usr/bin/sudo "apt-get" "update"
- Get:1 http://deb.debian.org/debian unstable InRelease [161 kB]
- Get:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index [63.6 kB]
- Ign:2 http://deb.debian.org/debian unstable/main amd64 Packages.diff/Index
- Get:3 http://deb.debian.org/debian unstable/main amd64 Packages [8640 kB]
- Fetched 8865 kB in 2s (5242 kB/s)
- Reading package lists...
-
2021-07-04 07:54.23 ---> using "9ae3421d19f8c83d02438eaed170405e5387b2c7938a3ce7ebe2243156f788cb" from cache
/: (run (cache (opam-archives (target /home/opam/.opam/download-cache)))
(network host)
(shell "\
\nopam remove -y \"ocaml-r.0.4.0\"\
\nopam install -vy \"ocaml-r.0.4.0\"\
\nres=$?\
\nif [ $res = 31 ]; then\
\n if opam show -f x-ci-accept-failures: \"ocaml-r.0.4.0\" | grep -q '\"debian-unstable\"'; then\
\n echo \"This package failed and has been disabled for CI using the 'x-ci-accept-failures' field.\"\
\n exit 69\
\n fi\
\nfi\
\n\
\n\
\nexit $res\
\n"))
Nothing to do.
[NOTE] ocaml-r.0.4.0 is not installed.
The following actions will be performed:
- install conf-r 1.0.0 [required by ocaml-r]
- install dune 2.9.0 [required by ocaml-r]
- install conf-pkg-config 2 [required by conf-r-mathlib]
- install sexplib0 v0.14.0 [required by base]
- install result 1.5 [required by dune-configurator]
- install csexp 1.5.1 [required by dune-configurator]
- install conf-r-mathlib 1 [required by ocaml-r]
- install dune-configurator 2.9.0 [required by base]
- install base v0.14.1 [required by ocaml-r]
- install stdio v0.14.0 [required by ocaml-r]
- install ocaml-r 0.4.0
===== 11 to install =====
The following system packages will first need to be installed:
pkg-config r-base-core r-mathlib
<><> Handling external dependencies <><><><><><><><><><><><><><><><><><><><><><>
Let opam run your package manager to install the required system packages? [Y/n] y
+ /usr/bin/sudo "apt-get" "install" "-qq" "-yy" "pkg-config" "r-base-core" "r-mathlib"
- debconf: delaying package configuration, since apt-utils is not installed
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- Setting up libpcre16-3:amd64 (2:8.39-13) ...
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- Setting up libvte-2.91-common (0.62.3-1) ...
- Setting up libicu67:amd64 (67.1-7) ...
- Setting up libdatrie1:amd64 (0.2.13-1) ...
- Setting up xdg-user-dirs (0.17-2) ...
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- Setting up libglib2.0-0:amd64 (2.66.8-1) ...
- Setting up libglvnd0:amd64 (1.3.2-1) ...
- Setting up libxcb-glx0:amd64 (1.14-3) ...
- Setting up perl-modules-5.32 (5.32.1-4) ...
- Setting up libreadline8:amd64 (8.1-2) ...
- Setting up libgdk-pixbuf2.0-common (2.42.2+dfsg-1) ...
- Setting up libxcb-shape0:amd64 (1.14-3) ...
- Setting up x11-common (1:7.7+22) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up libsensors-config (1:3.6.0-7) ...
- Setting up libdeflate0:amd64 (1.7-1) ...
- Setting up perl-openssl-defaults:amd64 (5) ...
- Setting up libnss-systemd:amd64 (247.3-5) ...
- First installation detected...
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- Setting up libxcb-shm0:amd64 (1.14-3) ...
- Setting up libgomp1:amd64 (10.2.1-6) ...
- Setting up libjbig0:amd64 (2.1-3.1+b2) ...
- Setting up libpcre2-16-0:amd64 (10.36-2) ...
- Setting up libcolord2:amd64 (1.4.5-3) ...
- Setting up libasan6:amd64 (10.2.1-6) ...
- Setting up libxcb-present0:amd64 (1.14-3) ...
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- Setting up zip (3.0-12) ...
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- Setting up libz3-4:amd64 (4.8.10-1) ...
- Setting up libpcre2-32-0:amd64 (10.36-2) ...
- Setting up libblas3:amd64 (3.9.0-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
- Setting up libglib2.0-data (2.66.8-1) ...
- Setting up libllvm11:amd64 (1:11.0.1-2) ...
- Setting up libjpeg62-turbo:amd64 (1:2.0.6-4) ...
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- Setting up libepoxy0:amd64 (1.5.5-1) ...
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- Setting up dbus (1.12.20-2) ...
- invoke-rc.d: could not determine current runlevel
- invoke-rc.d: policy-rc.d denied execution of start.
- Setting up libfribidi0:amd64 (1.0.8-2) ...
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- Setting up libpng16-16:amd64 (1.6.37-3) ...
- Setting up libpcre32-3:amd64 (2:8.39-13) ...
- Setting up libatomic1:amd64 (10.2.1-6) ...
- Setting up libtcl8.6:amd64 (8.6.11+dfsg-1) ...
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- Setting up pkg-config (0.29.2-1) ...
- Setting up fonts-dejavu-core (2.37-2) ...
- Setting up libpcre2-posix2:amd64 (10.36-2) ...
- Setting up libsensors5:amd64 (1:3.6.0-7) ...
- Setting up libncursesw6:amd64 (6.2+20201114-2) ...
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- Setting up libgfortran5:amd64 (10.2.1-6) ...
- Setting up libvulkan1:amd64 (1.2.162.0-1) ...
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- Setting up libxcb-dri2-0:amd64 (1.14-3) ...
- Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2) ...
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- Setting up liblua5.3-0:amd64 (5.3.3-1.1+b1) ...
- Setting up libpam-systemd:amd64 (247.3-5) ...
- Setting up r-mathlib (4.0.4-1) ...
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- Setting up libjson-glib-1.0-common (1.6.2-1) ...
- Setting up libatk1.0-0:amd64 (2.36.0-2) ...
- Setting up libtiff5:amd64 (4.2.0-1) ...
- Setting up libwayland-egl1:amd64 (1.19.0-2) ...
- Setting up libxss1:amd64 (1:1.2.3-1) ...
- Setting up libxkbfile1:amd64 (1:1.1.0-1) ...
- Setting up glib-networking-common (2.66.0-2) ...
- Setting up libisl23:amd64 (0.23-1) ...
- Setting up libdrm-common (2.4.104-1) ...
- Setting up libxcomposite1:amd64 (1:0.4.5-1) ...
- Setting up libicu-dev:amd64 (67.1-7) ...
- Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ...
- Setting up xdg-utils (1.1.3-4.1) ...
- update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
- Setting up libcc1-0:amd64 (10.2.1-6) ...
- Setting up liblocale-gettext-perl (1.07-4+b1) ...
- Setting up liblsan0:amd64 (10.2.1-6) ...
- Setting up cpp-10 (10.2.1-6) ...
- Setting up libblas-dev:amd64 (3.9.0-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
- Setting up libitm1:amd64 (10.2.1-6) ...
- Setting up libbz2-dev:amd64 (1.0.8-4) ...
- Setting up libtsan0:amd64 (10.2.1-6) ...
- Setting up libxkbcommon0:amd64 (1.0.3-2) ...
- Setting up libwayland-client0:amd64 (1.19.0-2) ...
- Setting up glib-networking-services (2.66.0-2) ...
- Setting up libx11-xcb1:amd64 (2:1.7.1-1) ...
- Setting up libice6:amd64 (2:1.0.10-1) ...
- Setting up liblapack3:amd64 (3.9.0-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
- Setting up libncurses-dev:amd64 (6.2+20201114-2) ...
- Setting up libxdamage1:amd64 (1:1.1.5-2) ...
- Setting up libxpm4:amd64 (1:3.5.12-1) ...
- Setting up libpcre2-dev:amd64 (10.36-2) ...
- Setting up libxi6:amd64 (2:1.7.10-1) ...
- Setting up libxrender1:amd64 (1:0.9.10-1) ...
- Setting up libpng-tools (1.6.37-3) ...
- Setting up libpcre3-dev:amd64 (2:8.39-13) ...
- Setting up libxtst6:amd64 (2:1.2.3-1) ...
- Setting up libgcc-10-dev:amd64 (10.2.1-6) ...
- Setting up libpng-dev:amd64 (1.6.37-3) ...
- Setting up libavahi-common3:amd64 (0.8-5) ...
- Setting up libjpeg-dev:amd64 (1:2.0.6-4) ...
- Setting up libxxf86dga1:amd64 (2:1.1.4-1+b3) ...
- Setting up libx11-dev:amd64 (2:1.7.1-1) ...
- Setting up libatspi2.0-0:amd64 (2.38.0-4) ...
- Setting up libreadline-dev:amd64 (8.1-2) ...
- Setting up libjson-glib-1.0-0:amd64 (1.6.2-1) ...
- Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ...
- Setting up libatk-bridge2.0-0:amd64 (2.38.0-1) ...
- Setting up libthai0:amd64 (0.1.28-4) ...
- Setting up dbus-user-session (1.12.20-2) ...
- Setting up perl (5.32.1-4) ...
- Setting up libfreetype6:amd64 (2.10.4+dfsg-1) ...
- Setting up libdata-dump-perl (1.23-1.1) ...
- Setting up libxfixes3:amd64 (1:5.0.3-2) ...
- Setting up libipc-system-simple-perl (1.30-1) ...
- Setting up libxml-xpathengine-perl (0.14-1) ...
- Setting up shared-mime-info (2.0-1) ...
- Setting up libxinerama1:amd64 (2:1.1.4-2) ...
- Setting up libxv1:amd64 (2:1.0.11-1) ...
- Setting up liblapack-dev:amd64 (3.9.0-3) ...
- update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
- Setting up libio-html-perl (1.004-2) ...
- Setting up libxrandr2:amd64 (2:1.5.1-1) ...
- Setting up ucf (3.0043) ...
- Setting up gcc-10 (10.2.1-6) ...
- Setting up libtimedate-perl (2.3300-2) ...
- Setting up libdrm2:amd64 (2.4.104-1) ...
- Setting up at-spi2-core (2.38.0-4) ...
- Setting up libwayland-cursor0:amd64 (1.19.0-2) ...
- Setting up cpp (4:10.2.1-1) ...
- Setting up libncurses5-dev:amd64 (6.2+20201114-2) ...
- Setting up libharfbuzz0b:amd64 (2.7.4-1) ...
- Setting up libgfortran-10-dev:amd64 (10.2.1-6) ...
- Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1) ...
- Setting up libsm6:amd64 (2:1.2.3-1) ...
- Setting up libalgorithm-diff-xs-perl (0.04-6+b1) ...
- Setting up libavahi-client3:amd64 (0.8-5) ...
- Setting up liburi-perl (5.08-1) ...
- Setting up libx11-protocol-perl (0.56-7.1) ...
- Setting up libdrm-amdgpu1:amd64 (2.4.104-1) ...
- Setting up libnet-ssleay-perl (1.88-3+b1) ...
- Setting up mesa-vulkan-drivers:amd64 (20.3.5-1) ...
- Setting up libpaper1:amd64 (1.1.28+b1) ...
-
- Creating config file /etc/papersize with new version
- Setting up gtk-update-icon-cache (3.24.24-4) ...
- Setting up libhttp-date-perl (6.05-1) ...
- Setting up libdrm-nouveau2:amd64 (2.4.104-1) ...
- Setting up libfile-basedir-perl (0.08-1) ...
- Setting up libtie-ixhash-perl (1.23-2.1) ...
- Setting up libstdc++-10-dev:amd64 (10.2.1-6) ...
- Setting up g++-10 (10.2.1-6) ...
- Setting up libfile-listing-perl (6.14-1) ...
- Setting up libfont-afm-perl (1.20-3) ...
- Setting up libfile-fcntllock-perl (0.22-3+b7) ...
- Setting up libclone-perl (0.45-1+b1) ...
- Setting up libdrm-radeon1:amd64 (2.4.104-1) ...
- Setting up fontconfig-config (2.13.1-4.2) ...
- Setting up libio-stringy-perl (2.111-3) ...
- Setting up libhtml-tagset-perl (3.20-4) ...
- Setting up libauthen-sasl-perl (2.1600-1.1) ...
- Setting up libxcursor1:amd64 (1:1.2.0-2) ...
- Setting up libdrm-intel1:amd64 (2.4.104-1) ...
- Setting up liblwp-mediatypes-perl (6.04-1) ...
- Setting up libgl1-mesa-dri:amd64 (20.3.5-1) ...
- Setting up libtry-tiny-perl (0.30-1) ...
- Setting up libnet-http-perl (6.20-1) ...
- Setting up libencode-locale-perl (1.05-1.1) ...
- Setting up dconf-service (0.38.0-2) ...
- Setting up libpaper-utils (1.1.28+b1) ...
- Setting up gcc (4:10.2.1-1) ...
- Setting up adwaita-icon-theme (3.38.0-1) ...
- update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
- Setting up gfortran-10 (10.2.1-6) ...
- Setting up libxt6:amd64 (1:1.2.0-1) ...
- Setting up libfile-desktopentry-perl (0.22-2) ...
- Setting up libcups2:amd64 (2.3.3op2-3+deb11u1) ...
- Setting up libwww-robotrules-perl (6.02-1) ...
- Setting up g++ (4:10.2.1-1) ...
- Setting up libgdk-pixbuf2.0-bin (2.42.2+dfsg-1) ...
- Setting up libhtml-parser-perl:amd64 (3.76-1) ...
- Setting up libfontconfig1:amd64 (2.13.1-4.2) ...
- Setting up libio-socket-ssl-perl (2.069-1) ...
- Setting up libhttp-message-perl (6.29-1) ...
- Setting up libhtml-form-perl (6.07-1) ...
- Setting up libfile-mimeinfo-perl (0.30-1) ...
- Setting up libhttp-negotiate-perl (6.01-1) ...
- Setting up fontconfig (2.13.1-4.2) ...
- Regenerating fonts cache...
- done.
- Setting up libxft2:amd64 (2.3.2-2) ...
- Setting up libxmu6:amd64 (2:1.1.2-2+b3) ...
- Setting up libglx-mesa0:amd64 (20.3.5-1) ...
- Setting up libglx0:amd64 (1.3.2-1) ...
- Setting up dconf-gsettings-backend:amd64 (0.38.0-2) ...
- Setting up libhttp-cookies-perl (6.10-1) ...
- Setting up libhtml-tree-perl (5.07-2) ...
- Setting up libtk8.6:amd64 (8.6.11-2) ...
- Setting up libpango-1.0-0:amd64 (1.46.2-3) ...
- Setting up libhtml-format-perl (2.12-1.1) ...
- Setting up libxaw7:amd64 (2:1.0.13-1.1) ...
- Setting up x11-xserver-utils (7.7+8) ...
- Setting up gfortran (4:10.2.1-1) ...
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
- update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
- Setting up libcairo2:amd64 (1.16.0-5) ...
- Setting up libgl1:amd64 (1.3.2-1) ...
- Setting up libnet-smtp-ssl-perl (1.04-1) ...
- Setting up libmailtools-perl (2.21-1) ...
- Setting up libhttp-daemon-perl (6.12-1) ...
- Setting up x11-utils (7.7+5) ...
- Setting up libcairo-gobject2:amd64 (1.16.0-5) ...
- Setting up libpangoft2-1.0-0:amd64 (1.46.2-3) ...
- Setting up libgtk-3-common (3.24.24-4) ...
- Setting up libpangocairo-1.0-0:amd64 (1.46.2-3) ...
- Setting up gsettings-desktop-schemas (3.38.0-2) ...
- Setting up librsvg2-2:amd64 (2.50.3+dfsg-1) ...
- Setting up r-base-core (4.0.4-1) ...
-
- Creating config file /etc/R/Renviron with new version
- Setting up librsvg2-common:amd64 (2.50.3+dfsg-1) ...
- Setting up r-cran-lattice (0.20-41-1+b1) ...
- Setting up r-cran-nlme (3.1.152-1) ...
- Setting up r-cran-cluster (2.1.1-1) ...
- Setting up r-cran-nnet (7.3-15-1) ...
- Setting up glib-networking:amd64 (2.66.0-2) ...
- Setting up r-cran-codetools (0.2-18-1) ...
- Setting up r-cran-boot (1.3-27-1) ...
- Setting up r-base-dev (4.0.4-1) ...
- Setting up libsoup2.4-1:amd64 (2.72.0-2) ...
- Setting up r-cran-spatial (7.3-13-1) ...
- Setting up r-cran-mass (7.3-53.1-1) ...
- Setting up r-cran-foreign (0.8.81-1) ...
- Setting up r-cran-matrix (1.3-2-1) ...
- Setting up r-cran-kernsmooth (2.23-20-1) ...
- Setting up r-cran-mgcv (1.8-34-1) ...
- Setting up libsoup-gnome2.4-1:amd64 (2.72.0-2) ...
- Setting up librest-0.7-0:amd64 (0.8.1-1.1) ...
- Setting up r-cran-class (7.3-18-1) ...
- Setting up libgtk-3-0:amd64 (3.24.24-4) ...
- Setting up r-cran-survival (3.2-10-1) ...
- Setting up libgtk-3-bin (3.24.24-4) ...
- Setting up libvte-2.91-0:amd64 (0.62.3-1) ...
- Setting up r-cran-rpart (4.1-15-2+b1) ...
- Setting up termit (3.1-1) ...
- update-alternatives: using /usr/bin/termit to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
- Setting up r-recommended (4.0.4-1) ...
- Setting up libwww-perl (6.53-1) ...
- Setting up liblwp-protocol-https-perl (6.10-1) ...
- Setting up libxml-parser-perl:amd64 (2.46-2) ...
- Setting up libxml-twig-perl (1:3.52-1) ...
- Setting up libnet-dbus-perl (1.2.0-1+b1) ...
- Processing triggers for libc-bin (2.31-4) ...
- Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.2+dfsg-1) ...
<><> Processing actions <><><><><><><><><><><><><><><><><><><><><><><><><><><><>
Processing 1/33:
Processing 2/33:
Processing 3/33:
Processing 4/33:
Processing 5/33:
Processing 6/33:
Processing 7/33: [conf-pkg-config: pkg-config]
Processing 8/33: [conf-pkg-config: pkg-config] [conf-r: R CMD]
-> retrieved base.v0.14.1 (cached)
Processing 9/33: [conf-pkg-config: pkg-config] [conf-r: R CMD]
-> retrieved csexp.1.5.1 (cached)
Processing 10/33: [conf-pkg-config: pkg-config] [conf-r: R CMD]
-> retrieved dune.2.9.0 (cached)
Processing 11/33: [conf-pkg-config: pkg-config] [conf-r: R CMD]
Processing 12/33: [conf-pkg-config: pkg-config] [conf-r: R CMD] [dune: ocaml bootstrap.ml]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "pkg-config" "--help" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/conf-pkg-config.2)
- Usage:
- pkg-config [OPTION?]
-
- Help Options:
- -h, --help Show help options
-
- Application Options:
- --version output version of pkg-config
- --modversion output version for package
- --atleast-pkgconfig-version=VERSION require given version of pkg-config
- --libs output all linker flags
- --static output linker flags for static linking
- --short-errors print short errors
- --libs-only-l output -l flags
- --libs-only-other output other libs (e.g. -pthread)
- --libs-only-L output -L flags
- --cflags output all pre-processor and compiler flags
- --cflags-only-I output -I flags
- --cflags-only-other output cflags not covered by the cflags-only-I option
- --variable=NAME get the value of variable named NAME
- --define-variable=NAME=VALUE set variable NAME to VALUE
- --exists return 0 if the module(s) exist
- --print-variables output list of variables defined by the module
- --uninstalled return 0 if the uninstalled version of one or more module(s) or their dependencies will be used
- --atleast-version=VERSION return 0 if the module is at least version VERSION
- --exact-version=VERSION return 0 if the module is at exactly version VERSION
- --max-version=VERSION return 0 if the module is at no newer than version VERSION
- --list-all list all known packages
- --debug show verbose debug information
- --print-errors show verbose information about missing or conflicting packages (default unless --exists or --atleast/exact/max-version given on the command line)
- --silence-errors be silent about errors (default when --exists or --atleast/exact/max-version given on the command line)
- --errors-to-stdout print errors from --print-errors to stdout not stderr
- --print-provides print which packages the package provides
- --print-requires print which packages the package requires
- --print-requires-private print which packages the package requires for static linking
- --validate validate a package's .pc file
- --define-prefix try to override the value of prefix for each .pc file found with a guesstimated value based on the location of the .pc file
- --dont-define-prefix don't try to override the value of prefix for each .pc file found with a guesstimated value based on the location of the .pc file
- --prefix-variable=PREFIX set the name of the variable that pkg-config automatically sets
-
- Usage:
- pkg-config [OPTION?]
-
- Help Options:
- -h, --help Show help options
-
- Application Options:
- --version output version of pkg-config
- --modversion output version for package
- --atleast-pkgconfig-version=VERSION require given version of pkg-config
- --libs output all linker flags
- --static output linker flags for static linking
- --short-errors print short errors
- --libs-only-l output -l flags
- --libs-only-other output other libs (e.g. -pthread)
- --libs-only-L output -L flags
- --cflags output all pre-processor and compiler flags
- --cflags-only-I output -I flags
- --cflags-only-other output cflags not covered by the cflags-only-I option
- --variable=NAME get the value of variable named NAME
- --define-variable=NAME=VALUE set variable NAME to VALUE
- --exists return 0 if the module(s) exist
- --print-variables output list of variables defined by the module
- --uninstalled return 0 if the uninstalled version of one or more module(s) or their dependencies will be used
- --atleast-version=VERSION return 0 if the module is at least version VERSION
- --exact-version=VERSION return 0 if the module is at exactly version VERSION
- --max-version=VERSION return 0 if the module is at no newer than version VERSION
- --list-all list all known packages
- --debug show verbose debug information
- --print-errors show verbose information about missing or conflicting packages (default unless --exists or --atleast/exact/max-version given on the command line)
- --silence-errors be silent about errors (default when --exists or --atleast/exact/max-version given on the command line)
- --errors-to-stdout print errors from --print-errors to stdout not stderr
- --print-provides print which packages the package provides
- --print-requires print which packages the package requires
- --print-requires-private print which packages the package requires for static linking
- --validate validate a package's .pc file
- --define-prefix try to override the value of prefix for each .pc file found with a guesstimated value based on the location of the .pc file
- --dont-define-prefix don't try to override the value of prefix for each .pc file found with a guesstimated value based on the location of the .pc file
- --prefix-variable=PREFIX set the name of the variable that pkg-config automatically sets
-
-> compiled conf-pkg-config.2
Processing 12/33: [conf-r: R CMD] [dune: ocaml bootstrap.ml]
Processing 13/33: [conf-r: R CMD] [dune: ocaml bootstrap.ml] [conf-pkg-config: mkdir]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "R" "CMD" "BATCH" "check.r" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/conf-r.1.0.0)
-> compiled conf-r.1.0.0
Processing 13/33: [dune: ocaml bootstrap.ml] [conf-pkg-config: mkdir]
-> retrieved dune-configurator.2.9.0 (cached)
Processing 14/33: [dune: ocaml bootstrap.ml] [conf-pkg-config: mkdir]
-> retrieved ocaml-r.0.4.0 (cached)
Processing 15/33: [dune: ocaml bootstrap.ml] [conf-pkg-config: mkdir]
-> retrieved result.1.5 (cached)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "install" "mkdir" "-p" "/home/opam/.opam/4.10.2/lib/pkgconfig" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/conf-pkg-config.2)
-> installed conf-pkg-config.2
Processing 15/33: [dune: ocaml bootstrap.ml]
Processing 16/33: [conf-r-mathlib: pkg-config libRmath] [dune: ocaml bootstrap.ml]
-> installed conf-r.1.0.0
Processing 17/33: [conf-r-mathlib: pkg-config libRmath] [dune: ocaml bootstrap.ml]
-> retrieved sexplib0.v0.14.0 (cached)
-> retrieved stdio.v0.14.0 (cached)
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "pkg-config" "libRmath" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/conf-r-mathlib.1)
-> compiled conf-r-mathlib.1
Processing 17/33: [dune: ocaml bootstrap.ml]
-> installed conf-r-mathlib.1
Processing 18/33: [dune: ocaml bootstrap.ml]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "ocaml" "bootstrap.ml" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/dune.2.9.0)
- ocamlc -output-complete-exe -w -24 -g -o .duneboot.exe -I boot unix.cma boot/libs.ml boot/duneboot.ml
- ./.duneboot.exe -j 71
-
Processing 18/33: [dune: ./dune.exe build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "./dune.exe" "build" "-p" "dune" "--profile" "dune-bootstrap" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/dune.2.9.0)
-> compiled dune.2.9.0
-> installed dune.2.9.0
Processing 20/33: [csexp: dune build]
Processing 21/33: [csexp: dune build] [result: dune build]
Processing 22/33: [csexp: dune build] [result: dune build] [sexplib0: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "csexp" "-j" "71" "@install" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/csexp.1.5.1)
-> compiled csexp.1.5.1
Processing 22/33: [result: dune build] [sexplib0: dune build]
-> installed csexp.1.5.1
Processing 23/33: [result: dune build] [sexplib0: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "result" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/result.1.5)
-> compiled result.1.5
Processing 23/33: [sexplib0: dune build]
-> installed result.1.5
Processing 24/33: [sexplib0: dune build]
Processing 25/33: [dune-configurator: dune build] [sexplib0: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "sexplib0" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/sexplib0.v0.14.0)
-> compiled sexplib0.v0.14.0
Processing 25/33: [dune-configurator: dune build]
-> installed sexplib0.v0.14.0
Processing 26/33: [dune-configurator: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "dune-configurator" "-j" "71" "@install" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/dune-configurator.2.9.0)
-> compiled dune-configurator.2.9.0
-> installed dune-configurator.2.9.0
Processing 28/33: [base: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "base" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/base.v0.14.1)
-> compiled base.v0.14.1
-> installed base.v0.14.1
Processing 30/33: [stdio: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "stdio" "-j" "71" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/stdio.v0.14.0)
-> compiled stdio.v0.14.0
-> installed stdio.v0.14.0
Processing 32/33: [ocaml-r: dune build]
+ /home/opam/.opam/opam-init/hooks/sandbox.sh "build" "dune" "build" "-p" "ocaml-r" "-j" "71" "@install" (CWD=/home/opam/.opam/4.10.2/.opam-switch/build/ocaml-r.0.4.0)
-> compiled ocaml-r.0.4.0
-> installed ocaml-r.0.4.0
Done.
# Run eval $(opam env) to update the current shell environment
2021-07-04 07:55.50 ---> saved as "d51704aab28d2dea0fa069a46183e320daafd893bbdf4d869176e94a9711391d"
Job succeeded
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